Results for "Data Mining Algorithm"

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  • Understanding PacBio

    This tutorial includes resources for learning more about PacBio data and bioinformatics analysis, and includes content...t presentations) to help you get started with your data p...e analysis Base Modification Analysis Barcoding Data Anal...

    2684 days ago

  • Bambus

    Bambus 2.0, the second generation Bambus scaffolder available as an open source pack...In particular, Bambus is able to accept contig linking data o...an directly use the output of MUMmer), physical mapping data, or...

    2876 days ago

  • KisSplice

    KisSplice is a software that enables to analyse RNA-seq data with or without a reference genome. It is an exact...d will quantify each variant in each condition. It has been tested on Illumina datasets...

    2876 days ago

  • RepeatModeler

    RepeatModeler is a de-novo repeat family identification and modeling package. At the heart...ement boundaries and family relationships from sequence data....ating the runs of RECON and RepeatScout given a genomic database...

    2874 days ago

  • vcfR

    Most variant calling pipelines result in files containing large quantities of variant info...t (vcf) is an increasingly popular format for this data....d their content is discussed in the vignette ‘vcf data.&rsq...

    2873 days ago

  • GeneMANIA

    Faster, more accurate algorithms function prediction "GeneMANIA (Multiple Association Network Integration Algorithm)" have however been developed in recent years and are publicly available on the web, indicating the future direction of function prediction.

    2870 days ago

  • Sushi: An R/Bioconductor package for visualizing genomic data

    Sushi: An R/Bioconductor package for visualizing genomic data

    2861 days ago

  • BRAKER: pipeline for fully automated prediction of protein coding genes with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes

    Gene finding in eukaryotic genomes is notoriously difficult to automate. The task is to desi...ide range of species. GeneMark-ET is a gene prediction tool that incorporates RNA-Seq data into...

    2008 days ago

  • CIRCOS Visualize !!

    Before uploading a data file, check the samples gallery to make sure that your data format is compatible. Your file must be plain text. Your data valu...

    2859 days ago

  • OPERA : Optimal Paired-End Read Assembler

    OPERA (Optimal Paired-End Read Assembler) i...ffolding. OPERA is based on an exact algorithm that is guaranteed to minimiz...) including refinements to its basic algorithm (to reduce local errors, impr...ript describing the new features and algorithms is available at Genome...

    2852 days ago