gbtools: Interactive Visualization of Metagenome Bins in R
We have developed gbtools, a software package that allows users to visualize metagenomic assemblies by plotting coverage (sequencing depth) and GC values of contigs, and...2647 days ago
2638 days ago
WGS Celera Assembler version 8.3rc2
These are release notes for Celera Assembler version 8.3rc2, which was released on May 2...vides a stable, tested, documented version of the software. The distribution is us...rceforge.net/ SAMtools], [http://www.cbcb.umd.edu/software/je...2632 days ago
DeCoSTAR - Detection of Co-evolution
DeCoSTAR is a software which aims at reconstructing ancestral gene or genome organizations, in the form of sets of...ages of adjacencies, and contains in particular all the features of previous software De...2628 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin da...tions that can be directly visualized in a genome browser. ChromHMM software v1...2623 days ago
2615 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-w...ing the ability to submit fuzzy sets, upload BED files, improved application programming interface and visualization o...2615 days ago
2610 days ago
A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
PAGIT addresses the need for software to generate high quality draft genomes. It is based on a series of programs t...nome, or an earlier assembly, onto the latest assembly. PAGIT bundles these software an...2600 days ago
CABOG: Celera Assembler with Best Overlap Graph
CABOG (Celera Assembler with Best Overlap Graph) is scientific software for DNA research. CABOG ha...tension of the Celera Assembler software that was originally developed...raft human genome sequence. The software was released to the public do...ing a jigsaw puzzle. The CABOG software wa...2597 days ago