Results for "big data"
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This tutorial includes resources for learning more about PacBio data and bioinformatics analysis,...ons) to help you get started with your data processing, as well as inform...Base Modification Analysis Barcoding Data Analysis Tools Minor Variant...2656 days ago
- Bambus 2.0, the second generation Bambus scaffolde...particular, Bambus is able to accept contig linking data other than specified by mate-...directly use the output of MUMmer), physical mapping data, or information about gene sy...
2848 days ago
- KisSplice is a software that enables to analyse RNA-seq data with or without a reference genome. It is an exact local transcri...fy each variant in each condition. It has been tested on Illumina datasets of up to 1G reads. Its me...
2848 days ago
- RepeatModeler is a de-novo repeat family identification...nt boundaries and family relationships from sequence data. RepeatModeler assists in aut...ng the runs of RECON and RepeatScout given a genomic database and uses the output to bu...
2846 days ago
- Most variant calling pipelines result in files containin...vcf) is an increasingly popular format for this data. The format of these files an...heir content is discussed in the vignette ‘vcf data.’ These files are typic...
2845 days ago
Sushi: An R/Bioconductor package for visualizing genomic data
Sushi: An R/Bioconductor package for visualizing genomic data2833 days ago
- Gene finding in eukaryotic genomes is notoriously difficult to automate. The task i...nge of species. GeneMark-ET is a gene prediction tool that incorporates RNA-Seq data into unsupervised training an...
1979 days ago
- Before uploading a data file, check the samples gallery to make sure that your data format is compatible. Your file must be plain text. Your data values must be non-negat...
2831 days ago
- Fermi is a de novo assembler with a particular focus on assembling Illumina sh...layout-consensus paradigm and uses the FM-DNA-index (FMD-index) as the key data structure. It is inspired by...
2824 days ago
- These tutorials are written for hundreds of bioinformaticians trying to cope with large volume of next-generation sequencing (NGS) data. NGS technologies brought a d...
2828 days ago
