Results for "gap"
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Bioinformatics software for biologists in the genomics era
...nal and translational inferences. However, the majority of the scientists at the forefront of experimental research are not bioinformaticians, so a gap exists between the user-frien...3815 days ago
- ...se differences Small indels Larger indel or block substitution events Gap filling Identification of local misassemblies, including optional opening of new gaps More at https://github.co...
3037 days ago
- ...ly, there is no software that can take full advantage of network theory approaches for the analysis of chromatin interaction datasets. To fill this gap, we developed a web-based app...
2897 days ago
- ...input contigs. In addition, Redundans will automatically close the gaps resulting from genome a...g: joining of genome fragments using paired-end and/or mate-pairs reads gap closing Redundans is: f...
2831 days ago
GARM:Genome Assembly, Reconciliation and Merging
...cess of finding probable compressions or extensions (CE) problems in the assemblies can be per-formed; contigs are joined back into scaffolds after gap recalculation2722 days ago
- quickmerge uses a simple concept to improve contiguity of genome assemblies based on long molecule sequences, often with dramatic outcomes. The program uses informati...
2722 days ago
FSA: Fast Statistical Alignment
...gabase-long sequences. FSA introduces several novel methods for constructing better alignments: FSA uses machine-learning techniques to estimate gap and substitution parameters o...2673 days ago
- This tool is for users to upgrade their metagenomics assemblies using long reads. This includes fixing mis-assemblies and scaffolding/gap-filling. If you encounter any issues, pleas...
2568 days ago
- ...this semester (not necessarily in order). Optimal sequence alignment (global, local, and glocal alignment &mdash with constant & affine gap penalties Algorithms and dat...
2377 days ago
ACANA: An accurate and consistent alignment tool for DNA sequences
...ed regions of sequences in order to achieve the best alignment. ACANA is also robust to the small changes of alignment parameters, particularly the gap extension score. As an accura...2370 days ago
