Structural variation: the hidden genomic treasure
.../ SVDetect http://svdetect.sourceforge.net/Site/Home.html BreakPtr, discovery of unbalanced structural variants (copy-number variants) with tiling microarrays Link ...2755 days ago
7th International Conference on Bioinformatics and Computational Biology (BICoB)
...and tools for docking; protein design Analysis of high-throughput biological data: Microarrays (nucleic acid, protein, array CGH, genome tiling, and other arrays), EST, SAGE...3551 days ago
2991 days ago
Commercial and public next-gen-seq (NGS) software
...DNA-Seq, DNA Methylation, Gene Expression, Exon, miRNA Expression, Copy Number, Allele-Specific Copy Number, LOH, Association, Trio Analysis, and Tiling. Supports all commercial sequ...3571 days ago
2127 days ago
LR_Gapcloser: a tiling path-based gap closer that uses long reads to complete genome assembly
LR_Gapcloser is a gap closing tool using long reads from studied species. The long reads could be downloaed from public read archive database (for instance, NCBI SRA database ) or be your own data. Then they are fragmented and aligned to scaffolds using BWA mem algorithm in BWA package. In the pa...Tags: LR_Gapcloser, tiling, path-based, gap, closer, long, reads, complete, genome, assembly
1504 days ago