BOL: Results for "Manta"

Results for "Manta"

- Jit@jit.aber
Structural variation: the hidden genomic treasure
...a by paired-end mapping Link TIGER, transduction inference in germline genomes using short read data Link MANTA https://github.com/Illumina/manta SV-Bay https://github.c...
2730 days ago

- Jit@jit.aber
Manta: rapid detection of structural variants and indels for germline and cancer sequencing applications.
Manta calls structural variants (SVs) and indels from mapped paired-end sequencing re...n small sets of individuals and somatic variation in tumor/normal sample pairs. Manta discovers, assembles and scor...
2197 days ago
- Jit@jit.aber
Parliament2: Runs a combination of tools to generate structural variant calls on whole-genome sequencing data
...to generate structural variant calls on whole-genome sequencing data. It can run the following callers: Breakdancer, Breakseq2, CNVnator, Delly2, Manta, and Lumpy. Because of synerg...
1465 days ago

- Jitendra Prajapati@jprajapati81
List of Bioinformatics Software Tools for Next Generation Sequencing
...ut sequencing datasets; calls variants found in <.05% of the population Input: BAM file input→ suggest running through GATK Output: Manta Description: Calls indels...
2937 days ago

- Rahul Nayak@rahul
Comment on "List of non-commercial NGS genotype-calling software"
...[ paper-2012 ] lumpy – lumpy: a general probabilistic framework for structural variant discovery. [ paper-2014 ] manta – Structural varia...
1170 days ago