NGMLR: long-read mapper designed to align PacBio or Oxford Nanopore
...ap-cost alignMents for Long Reads (ngmlr) is a long-read mapper design...g (complex) structural variations. Ngmlr uses an SV aware k-mer search...hm to compute the final alignment. Ngmlr uses a convex gap cost model...nnot be aligned linearly, enabling ngmlr to reliably align reads to a...2229 days ago
Long reads mapper bash script !
...2-2.3_x64-linux/minimap2 bwaMemLoc=/home/urbe/anaconda3/bin/bwa ngmlrLoc=/home/urbe/Tools/ngmlr/bin/ngmlr-0.2.3/ngmlr lamsaL...lease specify reads type: ont, pacbio" fi elif [ $toolName == "ngmlr" ]; then echo "Mapping wi...2150 days ago
Comment on "NGMLR: long-read mapper designed to align PacBio or Oxford Nanopore"
...get https://github.com/philres/ngmlr/releases/download/v0.2.7/ngmlr-0.2.7-linux-x86_64.tar.gz--20...sp; https://github.com/philres/ngmlr/releases/download/v0.2.7/ngml...ion=attachment%3B%20filename%3Dngmlr-0.2.7-linux-x86_64.tar.gz&...ion=attachment%3B%20filename%3Dngmlr-0.2.7-linux-x86_64.tar.gz&...1581 days ago