Understanding reads mapping and flags !
...tive” alignment, and the others are called “supplementary” and are distinguished by the supplementary alignment flag. Chimeric rea...lighment, for other alignment positions, we called them supplementary alignment. It seems that GAT...1866 days ago
CNIDARIA: fast, reference-free phylogenomic clustering
...aria is written in C++ and Python and is available at http://www.ab.wur.nl/cnidaria. Contact: Saulo Aflitos - sauloal@gmail.com Supplementary information: Supplementary data are available at Bioinfo...2908 days ago
2882 days ago
Comment on "LAMSA: fast split read alignment with long approximate matches"
...c split read region. [10] -g --gap-split [INT] Minimum length of gap that causes a split-alignment. [100] -S --soft-clip Use soft clipping for supplementary alignment. [false] -C --comme...2151 days ago