Comment on "Structural variation: the hidden genomic treasure"
This paper https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4479793/ provide many others tools and their comparative importance.2761 days ago
Comment on "Structural variation: the hidden genomic treasure"
...iation caller. GRIDSS calls variants based on alignment-guided positional de Bruijn graph break-end assembly, split read, and read pair evidence. https://github.com/PapenfussLab/gridss2761 days ago
Comment on "SGA: String Graph Assembler"
Try this hierarchical genome assembly (HGA) assembler https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4779561/2764 days ago
Comment on "Various scholarships around the world !!"
Internship Programme UNESCO You can apply for an internship if you fall under any of the following: Student currently enrolled in a bachelor or postgraduate deg...2785 days ago
Comment on "Method in Comparative genomics !!"
A PhD thesis on comparative genomics "METHODS FOR HIGH-THROUGHPUT COMPARATIVE GENOMICS AND DISTRIBUTED SEQUENCE ANALYSIS" @ http://drum.lib.umd.edu/bitstream/handle/1903/11669/Angiuoli_umd_0117E_12062.pdf;jsessionid=A30813F9A1A23A54D917BC34109FE38D?sequence=12786 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Rapid pair-wise synteny analysis of large bacterial genomes using web-based GeneOrder4.0 @ http://binf.gmu.edu:8080/GeneOrder4.0/2787 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
For bacterial synteny -- MicroScope: Microbial Genome Annotation & Analysis Platform @ https://www.genoscope.cns.fr/agc/microscope/home/index.php2787 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
An intersting paper explaining comparative genomics in metazoan eukaryotes "COMPARATIVE GENOMICS: GENOME-WIDE ANALYSIS IN METAZOAN EUKARYOTES" https://www.cs.rice.edu/~devika/comp470/papers/ureta-vidal2003.pdf2792 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
An intersting paper reviewed "An applications-focused review of comparative genomics tools: Capabilities, limitations and future challenges" http://bib.oxfordjournals.org/content/4/2/105.full.pdf2792 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
A comparative analysis of the genomes of Drosophila melanoga...ice that of yeast, but different gene families are expanded in each genome, and the multidomain proteins and signaling pathways of the fly and worm are...2792 days ago