Peregrine & SHIMMER Genome Assembly Toolkit
...99%). It can assemble a human genome from 30x reads within 20 cpu hours from reads to polished consensus. It uses Sparse HIereachical MimiMizER (SHIMMER) for fast read-to-read overla...899 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...or command- line program; Input: tab- deliminted depth chart format (converted from pileup files) Output: three hdf5 files and a vcf file Shimmer Description: standalone pr...2936 days ago