Genome Assembly Tools and Software - PART1 !!
...tch [2] to extend seed reads (or contigs generated by another assembler) into longer contigs, by iteratively calling Vmatch and Trinity, until some stop criteria are met. Currently,...2738 days ago
Source Code and Pseudo Code !!
...ry message and skip a line) add 1 to sorry total endif end While Print out totals: Number of consecs, ascendings, and sorries. Stop Some Keywords That Should...2711 days ago
Gap filling or Contigs extensions tools !
...than 100 kb to either end of C0. Set C = C'. e. Let S' denote the reads that contribute to C'. If S' does not contain any reads not present in S, stop. Otherwise, Set S = S'. 3....2217 days ago