List of generic simulation software/tools/resource with brief description and homepage !!!
...designed to benchmark RNA-Seq alignment algorithms and also algorithms that aim to reconstruct diff...The program given below is based on the algorithm described in Padhukasahasram...nomeSimla GenomeSIMLA is currently under development- however, we have a beta rele...3792 days ago
List of In-silico Binding Site Prediction Tools
...erred binding sites, the IBIS algorithm clusters binding sites formed...bis.cmm.ki.si/index.php algorithm for detection of structurally...ein pocket (cavity) detection algorithm based on Voronoi tessellation...e driven program. A GUI is in development and mdpocket (fpocket on md t...3798 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data anal...g containers, string matching algorithms, and other utilities, for fa...tion factor binding site. The algorithm extends the popular motif dis...in some part of the list. The algorithm was developed for detecting t...3679 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and reference asse...alignments using the Smith-Waterman algorithm. Features a number of support...mina reads. Uses a Needleman-Wunsch algorithm. Can support Bis-Seq. Commerc...QAN - A Consistency-based Consensus Algorithm f...3573 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
...Bioresources and Sustainable Development (IBSD), Imphal, Manipur...of Science, Technology & Development Studies, New Delhi NPL - Na...search Defence Research and Development Organisation Directorate of...formation Centre Centre for Development of Advanced Computing Inter...2625 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and reference as...alignments using the Smith-Waterman algorithm. Features a number of support...mina reads. Uses a Needleman-Wunsch algorithm. Can support Bis-Seq. Commerc...QAN - A Consistency-based Consensus Algorithm f...3297 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools including ali...utput: 2Kplus2 Description: algorithm searches graphs produced by d...file, reference genome and mapping algorithm an experiment directory will...tudy pre-mRNA splicing; combines 12 algorithms...2963 days ago
Worldwide funding agencies to fund your bioinformatics research !!
Are you seeking funding for research or train...engaged in scientific research and development projects that meet federal R&...nal research conferences and career development grants. The Cystic Fibrosis...els, gene therapy, neurobiology and development of the basal ganglia, cell su...2992 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence reads a...ightweight Resources Assembly Algorithm Lightweight resources assembly algorithm for high-throughput sequencin...larize genome assemblies. The algorithm and benchmarks are described...s cutting-edge technology and algorithms,...2740 days ago
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions t...hose actions are to be executed. An algorithm is merely the sequence of ste...uage that helps programmers develop algorithms. Pseudocode is a "text-based...e of pseudocode to elaborate on the algorithmic...2713 days ago