Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
Hidden Markov Models, the Viterbi Algorithm, and CpG Islands (in VB6) Problem : The CG island is a stretch of DNA...erstanding of HMM read this excellent tutorial http://www.cs.ubc.ca/~murphyk/Software/HM...3877 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...edCentral [describes the RSEM software package] Comparing genomes a...LA are available: Intro to programming and graphics Data manipul...books on specific topics in R programming are also available through Am...-configured with a variety of software tools installed and ready to use...3831 days ago
List of bioinformatics open source projects/software.
...p://www.bioconductor.org/ R (programming language) language toolkit...p://biohaskell.org/ Haskell (programming language) BioJava http:/...ility between systems biology software Galaxy http://galaxyproject.or...https://www.openclinica.com/ software for capturing and managing data...3808 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with brief descri...rv.rpbs.univ-paris-diderot.fr/software/cs-pseq-gen.htmlDAWG An appli...://genfaculty.rutgers.edu/hey/software#fpgFREGENE FREGENE is a C++ p...son/mbs modifying Hudson's ms software to generate samples of DNA se...3789 days ago
List of In-silico Binding Site Prediction Tools
...ation and residue selection. The software provided can easily be integr...tested. CONCLUSIONS: The FunFOLD software is freely available as both a...ation. It was developed in the C programming language and is currently...http://www.caver.cz/ CAVER is a software tool for analysis and visualizat...3796 days ago
Linux for bioinformatician !!!
Linux, free operating system for computers, provides several powerful admin tools and utilities which will help you...ase. The field of bioinformatics relies heavily on Linux-based computers and software. A...3757 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them...collection of databases implementing the BioMart software suite (http:// www.biomart.or...s the analysis of splice junctions. The following software su...3676 days ago
Commercial and public next-gen-seq (NGS) software
...data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection, CHiP...h Lasergene Sequence Analysis software for additional analysis and v.... SWIFT - The SWIFT suit is a software collection for fast index-bas...France. MapNext - MapNext: A software to...3571 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Diagnostics (CDFD), Hyderabad ( Institute of Bio...logy Indira Gandhi Institute of Development Research National Centre for Software Te...2623 days ago
Rosalind Problem Solution with Perl
Rosalind is a platform for learning bioinformatics and programming through problem solving. Take a tour to get the hang of how Rosalind works. Bioinformatics Textbook Track Find more about Rosalin...3304 days ago