Useful Publications and Websites for Deep Sequencing Data Analysis
...ysis R-SAP: a multi-threading computational pipeline for the characteriza...reproducible, and transparent computational research in the life sciences...CLA are available: Intro to programming and graphics Data manipulati...books on specific topics in R programming are also available through Am...3822 days ago
List of bioinformatics open source projects/software.
Open source software is software that can be freely used, chan...Bioconductor http://www.bioconductor.org/ R (programming language) language toolkit B...on BioHaskell http://biohaskell.org/ Haskell (programming language) BioJava http://bi...3800 days ago
List of In-silico Binding Site Prediction Tools
...ucture-based drug design. Many computational methods for the prediction of...macho Lab in the Department of Computational and System Biology at the Uni...buried residues, we describe a computational procedure for calculating the...ion. It was developed in the C programming language and is currently ava...3787 days ago
Linux for bioinformatician !!!
Linux, free operating system for computers, provides several powerful admin tools and utilities which will help you to...asic tools, which will help you to become an effective bioinformatician and computation...3748 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from Bioconductor provides an a...3667 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq software...3562 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows for the opening and analys...BioGene was produced in affiliation with the Computational Biology Center at Memorial Sl...h; SNP database of effects, with predictions of computation...3584 days ago
Rosalind Problem Solution with Perl
Rosalind is a platform for learning bioinformatics and programming through problem solving. Take a tour to get the hang of how Rosalind works. Bioinformatics Textbook Track Find more about Rosalin...3295 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq softwar...3285 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools including alignment, RNA-Seq, DNA-Seq, ChIP-Seq, Small RNA-Seq, Genome Browser, visualizations, Biological I...2952 days ago