List of Bioinformatics Software Tools for Next Generation Sequencing
...NCBI, Ensembl, and Uniprot IDs are provided for genes, transcripts and proteins when applicable”; Inpu...ram, also has its own database; Classification system used to classify proteins and their genes; Also, &ldquo...2936 days ago
Tools for bacterial whole genome annotation
...ic and prokaryotic genome projects to independently annotate their genomes and to create genome databases. It identifies repeats, aligns ESTs and proteins to a genome, produces ab-init...2359 days ago
List of visualization tools for network biology
...raction network that SNOW hosts http://snow.bioinfo.cipf.es STITCH Resource to explore known and predicted interactions of chemicals and proteins http://stitch.embl.de/ STRI...2316 days ago
Tools to Predict the Impact of Missense Variants !
...S)“Predicts the functional impact of amino acid substitutions in proteins, such as mutations discovered...and its weighting scheme attributes higher tolerance scores to SNVs in proteins, related proteins, or domains...2231 days ago
Protein-Protein Interaction Sites Predictions !
...ls) CHED Web server for predicting soft metal binding sites in proteins DBD-Hunter A knowledge-base...t contact DNA using neural network method iDBPs Predicts DNA binding proteins for proteins with known 3D st...2230 days ago
Tools for Protein-Protein Docking !
...note: The proper treatment of flexibility in protein–protein docking is still an active field of research. You first should analyzed your proteins in order to define their conf...2230 days ago
Ancestral sequence reconstruction steps !
....nex file) 4.2- GARD deployed in webserver in the DataMonkey "http://www.datamonkey.org/" - turning to the amino acid seaview -> view proteins -> save as ...) Ideally do...2207 days ago