Results for "RNA structure"
Top-level pages
alignment: the mapping of a raw sequence read to a location within a ref...quencing, both ends of a single DNA or RNA fragment are sequenced, but t...ess where both ends of a single DNA or RNA fragment are sequenced, but t...process where only one end of a DNA or RNA fragm...2896 days ago
Genome Assembly Tools and Software - PART1 !!
...ly formatted to specific data structure. Currently, existing data structure for this usage can be p...ies an align-layout-consensus structure, consisting of three ma...l approach to reconstruct the structure of a viral quasispecies from...tome assembler that assembles RNA-seq reads into transcripts. SSP aim...2712 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...y reverse transcriptase, from a Messenger RNA template ( Messenger RNA contains the coded informatio...possessed that feature. homology -- Two structures are considered homologous wh...rom a common ancestor which possessed the structure. This may be difficult to det...2489 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignment for...ances from reference sequences and RNA-seq data (k-mer based) Softw...he expression of transcripts using RNA-seq data (uses k-mers)...g gene k-mers profiles of the RNA-seq p...2398 days ago
- When you have both Illumina and Nanopore data, then SPAdes remains a good opt...is required for metagenomic sample data --rna this flag is required for RNA-Seq data --plasmid...[default: 250] --tmp-dir <dirname>...
2378 days ago
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarrays) in the late 00’s and...ing are the useful links: Single Cell RNAseq data analysis Tutorial A...for low-level analysis of single-cell RNA-seq data A step-by-step work...t-factor models applied to single-cell RNA-seq d...2377 days ago
- RNA-sequencing (RNA-seq) has a wide variety of applications, but no sing...s. We review all of the major steps in RNA-seq data analysis, including...ion, differential gene expression, alternative splicing, functional anal...ene-level exploratory analysis and DE RNAseq an...
2377 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evolution as well as their impact on genome sequencing, assembly, annotation and alignment has generated increasing interest in developi...2301 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
Strand NGS is a biologist friendly NGS analysis tool that allows biologi...for the analysis and visualization of RNA-Seq data. This webinar will g...ort and elastic genome browser used in RNA-Seq workflow that supports la...ive an overview of the features in the RNA-Seq d...2291 days ago
Tools to Predict the Impact of Missense Variants !
Prioritizing missense variants for further experimental investigation is a key cha...en‐2 (PP2)“Predicts possible impact of an amino acid substitution on the structure and function of a human prote...2230 days ago
