Run miniasm assembler on nanopore reads !
Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and output...2357 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of the world wide web. Dynamic web p...recent versions are exploring high-scalability, event-based request...jolicious (Mojo) framework has a real-time design based on...2349 days ago
BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries
BBSplit internally uses BBMap to map reads to multiple genomes at once, and determine which genome...use. BBSplit tracks this additional ambiguity information and decides how to use it based on...2342 days ago
List of visualization tools for network biology
Network analysis is any structured technique used to mathematically analyze a circuit...ion and analysis of biological networks and Petri nets based on life-...nfow.dep.usal.es/apid/ Arcadia Translates text-based des...2315 days ago
List of visualization tools for genome alignments
Genome browsers are useful not only for showing final results but also...ava application that uses a novel graph-based representation to display a s...-1487072-p176815501 LookSeq Web-based visualiz...e.net/projects/sewal STAR A web-based int...2311 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
Strand NGS is a biologist friendly NGS analysis tool that allows biologists to analyze the...ience in molecular biology, next-generation sequencing based testing,...nd NABL accredited lab validating and interpreting NGS based dia...2291 days ago
Some useful Bioinformatics links
Reference-free prediction of rearrangement breakpoint reads | Bioinforma...ine-overview.html Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions. -...lh3/fermi: A WGS de novo assembler based on the F...1/sequence/ ksahlin/BESST: BESST - scaffolde...2269 days ago
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Tools to Predict the Impact of Missense Variants !
Prioritizing missense variants for further experimental investigation is a key challenge in curren...n on the element” phyloP“Compute conservation or acceleration P values based on...2231 days ago
Protein-Protein Interaction Sites Predictions !
The study of Protein–Protein Interactions (PPIs) has a crucial role in biology, medicine and...server for predicting soft metal binding sites in proteins DBD-Hunter A knowledge-based met...2229 days ago