List of visualization tools for genome alignments
...ation that uses a novel graph-based representation to display a s...176815501 LookSeq Web-based visualization of sequences de...genome position files in NGS studies http://sing.ei.uvigo.es/pi...ects/sewal STAR A web-based integrated solution to manageme...2337 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
Strand NGS is a biologist friendly NGS analysis tool that allows biologists to analyze...ce in molecular biology, next-generation sequencing based testing, clinical genomics, a...NABL accredited lab validating and interpreting NGS based d...2318 days ago
Python learning resources for bioinformatics and computational biologist !
Python is a general-purpose language, which means it can be used to build just about...s with Python & Pygame - Al Sweigart (2.7) Modeling Creativity: Case Studies in Python - Tom D. De Sm...2309 days ago
Some useful Bioinformatics links
Reference-free prediction of rearrangement breakpoint reads | Bioinformatics | Oxford...some-scale scaffolding of de novo genome assemblies based on chromatin interactions. -...s-64-bit-version lh3/fermi: A WGS de novo assembler based o...2295 days ago
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Tools to Predict the Impact of Missense Variants !
Prioritizing missense variants for further experimental investigation is a key challenge in current sequencing studies for exploring complex and M...dquo;Compute conservation or acceleration P values based on an alignment and a model of...2257 days ago
Protein-Protein Interaction Sites Predictions !
The study of Protein–Protein Interactions (PPIs) has a crucial role in biology, medicine and the pharmaceuti...r for predicting soft metal binding sites in proteins DBD-Hunter A knowledge-based m...2256 days ago
Ligand Docking Tools and Software !
Ligand docking referred to cases where small mole...Systematic Flexible ligandX-Score based DOCK Systematic (IC) Flexi...hemScore (empirical), ASP (knowledge based) ICM Stochastic (MC) Flexi...(empirical) Point to note: Several studies have shown that the performan...2256 days ago
Tools for Protein-Protein Docking !
Predicting the structure of protein–protein complexes using docking approaches is a difficult problem whose...,VDW and desolvation energy termsMD simulated annealing refinement . Filtering based o...2256 days ago
Ancestral sequence reconstruction steps !
Ancestral sequence reconstruction (ASR) – also known as ancestral gene/sequence reconstruction/res...he amino acid seaview -> view proteins -> save as ...) Ideally do a tree-based g...2233 days ago