Results for "r"
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Worldwide funding agencies to fund your bioinformatics research !!
Are you seeking funding for research or training in a particular area? Check out the following...ants of up to $25,000 to doctoral and post-doctoral students...ntists working in largely underrecognized and underfunded bio...;The ATA is committed to supporting research into better ways...2990 days ago
- SLURM is a queue management system and stands for Simple Linux Utility for Resource Management. SLURM wa...ilar in many ways to most other queue systems. You write a ba...submit jobs to SLURM, how SLURM decides when to schedule you...ed to be there. No one can infringe on that memory space and...
2966 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that many genomes contain s...nucleotides along a DNA (deoxyribonucleic acid) or RNA (ribon...(phosphate bound to the 3' carbon) ends to indicate a polari...Imperfect Microsatellite Extractor (IMEx) Spectral Repeat...2263 days ago
- Reformat is a member of the BBMap/BBTools package. It is a multipurpose tool designed for converting reads or other nucleotide...ion. Typical usage examples: Reformat fastq into fasta: refo...s, please post them in this thread. For people using a non-b...
2766 days ago
- ...p; ls — list items in current directory ...current directory and show directories with a slash and exec...t the contents of file as it grows, starting with the last 10... 2 — write only 1 &...
2926 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
...----- Gene Set Clustering based on Functional annotation GeneSCF serves as command line tool for c...list of genes given by the users based on functional annotati...bols as a input. GeneSCF supports more organisms from V1.1. E....1 and above) by accessing source databases. With command-lin...2923 days ago
- Bash Script source: https://gist.github.com/santhi.../367befcf5216be4b1fd9 Information: This script converts EnsEMBL GTF (Ex: https...le.GTF) file to annotation table format. It generated two files1)...enst_annotation.txt)2) Gene wise chromosome location with informat...
2158 days ago
- alignment: the mapping of a raw sequence read to a location within a reference genome. The mapping occur...p://www.ncbi.nlm.nih.gov/nuccore/NC_008253 contains entire ge...d in FASTQ and SAM files. paired-end sequencing: sequencing...des options for converting, sorting, indexing and viewing SAM...
2921 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence reads and a file of...encing data. Intend of using traditional de Bruijn Graph, SWA...der to address variable transcript expression levels. It firs...emblies, especially those generated by the de novo assembly o...2737 days ago
Source Code and Pseudo Code !!
...helps programmers develop algorithms. Pseudocode is a "text-b...f 2. Set total to zero Set grade counter to one W...flag to 0 set consec cntr to 1 set ascending cntr...alls to Functions should appear as: Returns in func...2711 days ago
