Results for "k-mers"
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Commercial and public next-gen-seq (NGS) software
...SSAKE) is a genomics application for aggressively assembling millions of short nucleotide sequences by progressively searching for perfect 3'-most k-mers using a DNA prefix tree. Auth...3570 days ago
Software packages for next gen sequence analysis
...SSAKE) is a genomics application for aggressively assembling millions of short nucleotide sequences by progressively searching for perfect 3'-most k-mers using a DNA prefix tree. Auth...3294 days ago
Genome Assembly Tools and Software - PART1 !!
...performs k-mer counting. Then we find frequent k-mers whose frequencies are over ce...ain threshold. We then assemble these frequent k-mers into consensus repeats (in th...k, it predicts the number of distinct genomic k-mers in the dataset, and returns t...2737 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...pts using RNA-seq data (uses k-mers) https://combine-lab.github....;sig-mers, a special type of k-mers) Software (C++) http://www....ic mutations; algorithm uses k-mers and is based on colored de Br...orrector for Illumina reads using k-mers Software (C++) https://gith...2423 days ago
