Results for "Snippy"
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Snippy: Rapid haploid variant calling and core SNP phylogeny
Snippy finds SNPs between a haploid reference genome and y...files in a single folder. It can then take a set of Snippy results using the same refere...NP alignment (and ultimately a phylogenomic tree). snippy --cpus 16 --outdir mysnps --r...2052 days ago
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List of Bioinformatics Software Tools for Next Generation Sequencing
...ls and parent-offspring trios Input: BAM (that has been aligned in BWA and Samtools Output: BCF that can be formatted to VCF using bcftools Snippy Description: finds indels...2936 days ago
