Results for "IT"
Bio-Scripts
...vo_asm) [jnarayan@hmem00 ~]$ git clone https://github.com/cdunn2001/git-sym.git fatal: destination path 'git-sym' already exists and is no...hmem00 ~]$ git clone https://github.com/pb-cdunn/FALCON-exampl.../n/jnarayan/FALCON-examples/.git/git-sym-local/links' -> in d...2095 days ago
Perl script to create a consensus of nucleotide sequences !
..."\n"; # ATAAA print consensus(@instances2),"\n"; # ATAAA exit; sub consensus{ my @mi =...h of the longest element foreach my $j ( 0 .. $w-1 ){ # Initialize the base counts....2093 days ago
- ...g/downloads/source ➜ tools git:(master) ✗ cd nupack3.0.6 ➜ nupack3.0.6 git:(master) ✗ make make -C src/...n value of ‘fgets’, declared with attribute warn_unused_result...n value of ‘fgets’, declared with attribute warn_unused_result...[-Wunused-result] fscanf(initFile, "%s", tmpString); ^~~...
2087 days ago
- ➜ Tools git:(master) ✗ wget https://github.com/samtools/htslib/releas...1178859/1178859] ➜ Tools git:(master) ✗ tar -vxjf htslib-1...hts_os.h htslib-1.9/htslib/kbitset.h htslib-1.9/htslib/kfunc...slib-1.9/configure ➜ Tools git:(master) ✗ cd htslib-1.9 ➜...
2080 days ago
Installing Platypus on Ubuntu !
(py27) ➜ Tools git:(master) ✗ git clone https://github.com/andyrimmer/Platypus.git Cloning...dirs] Error 1 ➜ htslib-1.9 git:(master) ✗ sudo make install...nda3/envs/py27/lib/python2.7/site-packages/Cython/Compiler/Mai...ll -Wstrict-prototypes -fPIC -Itabix -Ipysam -I/home/urbe/anac...2080 days ago
- ...Purple Cyan='\033[0;36m' # Cyan White='\033[0;37m' # White # Bold BBlack='\033[1;30...urple UCyan='\033[4;36m' # Cyan UWhite='\033[4;37m' # White...rple BICyan='\033[1;96m' # Cyan BIWhite='\033[1;97m' # White...
2079 days ago
- #! /usr/bin/Rscript ## Collect arguments args
2065 days ago
- #!/bin/bash Plot the coverage script chr=$1 start=$2 end=$3 samtools depth deduped_MA605.bam > deduped_MA605.coverage awk '$1 == $chr {print $0}' deduped_...
2065 days ago
Setting up falconUnzip conda environments for genome assembly !
...7_0 282 KB bioconda unittest2-1.1.0 |...131 KB conda-forge sqlite-3.25.3 |..._1001 conda-forge sqlite: 3.25.3-hb1...# # https://github.com/PacificBiosciences/pbb...2051 days ago
- http://stackoverflow.com/questions/6373277/git-sync-local-repo-with-remote-one This makes your...epo. Remember to replace origin and master with the remote and branch that y...tch origin git reset --hard origin/master git clean -f -d
2043 days ago
