Results for "AI"
Bio-Scripts
Rules to run fastp / Snakemake !
...s.log" shell: "fastp --in1 {input.fwd} --in2 {input.rev} " "--out1 {output.fwd} --out2 {output.rev} --thread {threads} --cut_tail --html {output.html} --json...929 days ago
- ...s once for each record in a file. #NF: NF command keeps a count of the number of fields within the current input record. #FS: FS command contains the field separator charact...
923 days ago
Run Pango on your multifasta file !
...of sequences detected: 320 Total passing QC: 293 Data files found: Trained model: /home/jnarayan/anac...hreads -------------------- ------- ------------- ------------- add_failed_seqs 1...915 days ago
Extract fasta header with ids !
#Extract all the fasta header name with certain ids kraken --db ../../../../DATABASE/minikraken_20171019_8GB.tgz out.fa more out.fa_class.txt | grep "227859" | awk '{print $2}'...905 days ago
- ...kports.functoo~ 1.6.1-pyhd3eb1b0_0 --> 1.6.4-pyhd3eb1b0_0 conda conda-forge::conda-4.10.3-py38h578d9b~ --> pkgs/main::conda-4.11.0-py38h06a4308_0...
890 days ago
- ...link: https://sourceforge.net/projects/tdm-gcc/ Once you download and install the compiler, you need to open the cmd, navigate to the folder containing the .cpp files using the...
878 days ago
Installing SEVA environment in Conda !
...####################################################################################################################################### | 100% r-praise-1.0.0 | 23 KB | #...866 days ago
- ...be SUPERSEDED by a higher-priority channel: ca-certificates pkgs/main::ca-certificates-2021.10.26~...forge::ca-certificates-2021.10.8-ha878542_0 openssl pkgs/main::openssl-1.1.1m-h7f8727e_0 -...
853 days ago
- ...1_gnu 22 KB cairo-1.14.12 |..._libgcc_mutex pkgs/main/linux-64::_libgcc_mutex-0.1-...0 harfbuzz pkgs/main/linux-64::harfbuzz-1.7.6-h5f...################### | 100% cairo-1.14.12 | 905 KB...
853 days ago
- ...erpretive programming language originally released in 1995. It is heavily used in the bioinformatics community largely due to numerous R libraries available on bioconductor. It take...
851 days ago
