Results for "index"

Bio-Scripts

  • Bowtie2 Mapping !

    ..._contig_for_mapping.fasta toy_dataset_contig_for_mapping.btindex bowtie2 -x toy_dataset_contig_for_mapping.btindex -f -U toy_dataset_reads_for_m....bam -o toy_dataset_mapped_species1_sorted.bam samtools index toy_dataset_mapped_species1_s...

    910 days ago

  • Raku script to find SSRs in fastq file !

    ...$max-repeat - $min-repeats + 1); my $repeat-length = $max-repeat - $min-repeats + 1; if $sequence.substr($max-repeat).index($repeat) == 0 {...

    155 days ago