Points: 331
LEGE
To #uninstall #phonelink in window run it in poweshell: Get-AppxPackage Microsoft.YourPhone -AllUsers | Remove-AppxPackage
(71 days ago)
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About me
Discuss all about bioinformatics !
- LEGE bookmarked Variant Calling Pipeline
- LEGE created a new bio-script Install Edirect !
- LEGE created a new bio-script Extract the fasta sequence using ids
- LEGE posted a new ad in the Opportunity Bioinformatician at QUB, UK
- LEGE created a page Bioinformatics Lecture Notes
- LEGE created a new bio-script R script to add P-Values in plots !
New BLAST Core Nucleotide Database (core_nt)
By LEGE 100 days agohttps://ncbiinsights.ncbi.nlm.nih.gov/2024/07/18/new-blast-core-nucleotide-database/Cleaner BLAST Databases for More Accurate Results
By LEGE 212 days agoRemoving contaminated sequences using NCBI quality assurance toolsBlast on Docker, Google Cloud, Amazon Cloud
By LEGE 1596 days agoAs announced in a previous post, we offer a Docker version of NCBI BLAST+ that you can use locally or on the Google Cloud where we have pre-loaded BLAST databases. We are happy to announce that the same functionality is now available on the...
Jit
5557 points
5557 points
Jitendra Narayan
2547 points
2547 points
Rahul Nayak
2300 points
2300 points
Neel
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1586 points
Rahul Agarwal
1188 points
1188 points
- By LEGE 71 days agoTo #uninstall #phonelink in window run it in poweshell: Get-AppxPackage Microsoft.YourPhone -AllUsers | Remove-AppxPackage
- By LEGE 168 days ago#NCBI is planning to push some updated on #taxonomy #classification https:/
/ ncbiinsights.ncbi.nlm.nih.gov/ 2024/ 06/ 04/ changes-ncbi-taxonomy-classifications/ - By LEGE 274 days agoWalk-in Bioinformatics interview @ https:/
/ cdri.res.in/ pdf/ recruitment/ Advt_01_2024_Project_Staff.pdf - By LEGE 321 days ago
Install Edirect !
By LEGE 49 days agoExtract the fasta sequence using ids
By LEGE 49 days agoR script to add P-Values in plots !
By LEGE 64 days agoCommands to create conda env
By LEGE 192 days ago
Variant Calling Pipeline
By LEGE 33 days agogithub.com - The variantcalling.nf nextflow script will take any number of samples with paired-end reads in FASTQ format, map reads using Bowtie2, process BAM files, and finally call variants using BCFtools v1.21 and/or Freebayes v1.3.6. If part of the...SVbyEye: R Package to visualize alignments between two or multiple DNA sequences
By LEGE 65 days agogithub.com - R Package to visualize alignments between two or multiple DNA sequences includinga number of functionalities to facilitate processing of alignments in PAF format. SVbyEye, an open-source R package to visualize and annotate sequence-to-sequence...LoVis4u: Locus Visualisation tool for comparative genomics
By LEGE 65 days agogithub.com - Description LoVis4u is a bioinformatics tool for Loci Visualisation. LoVis4u, a command-line tool and Python API designed for highly customizable and fast visualisation of multiple genomic loci. LoVis4u generates vector images in...Figeno: Tool for plotting sequencing data along genomic coordinates.
By LEGE 65 days agogithub.com - Tool for plotting sequencing data along genomic coordinates. FIGENO is a FIGure GENerator for GENOmics With figeno, you can plot various types of sequencing data along genomic coordinates. Video...
16sRNA Database Download
By LEGE 211 days agoDownloading 16S rRNA databases can be crucial for various bioinformatics analyses, especially in microbiome research.Entire Human Genome Sequencing !
By LEGE 233 days agoCost-effective whole human genome sequencing has revolutionized the landscape of genetic research and personalized medicine by making comprehensive genetic analysis accessible to a wider population. Through advancements in sequencing technologies,...Software for genome assembly !
By LEGE 1544 days agoList of bioinformatics tools/Software Website References for genome assembly:
The Sheppard Lab
Category: Bioinformatics
PI: Samuel K. Sheppard, Professor in Pathogen Genomics & Evolution
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Libraries or management tools for high throughput sequencing data
Last updated 48 days ago by LEGEGATB Library. The Genome Analysis Toolbox with de-Bruijn graph. A large part of tools developed by the GenScale team are based on this library.These methods enable the analysis of data sets of any size on multi-core desktop...-
Bioinformatics Lecture Notes
Last updated 51 days ago by LEGEStudy Resources for ECM3413 - Bioinformatics Contents General Information Lecture Slides Past Exam Paper Continuous Assessments Suggested Reading List General Information This module runs in Semester 2. It is... -
Tools to access the quality of your assembled genome !
Last updated 104 days ago by LEGEFASTA VALIDATOR + SEQKIT RMDUP: FASTA validation GENOMETOOLS GT GFF3VALIDATOR: GFF3 validation ASSEMBLATHON STATS: Assembly statistics GENOMETOOLS GT STAT: Annotation statistics NCBI FCS ADAPTOR: Adaptor contamination pass/fail NCBI...
Question: How to downgrade the Perl
Question: Alienomics error, how to fix it !
Question: What is the p-value?
Question: Unable to restart Apache !
