Points: 565
LEGE
To #uninstall #phonelink in window run it in poweshell: Get-AppxPackage Microsoft.YourPhone -AllUsers | Remove-AppxPackage
(718 days ago)
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About me
Discuss all about bioinformatics !
- LEGE published a blog post When Thousands of Bacterial Genomes Become One Giant Map
- LEGE posted a new ad in the Opportunity PhD Studentship: Statistical Complexity in the Evolution of Biological Networks
- LEGE created a new bio-script Onliner to convert minimap2 to PAF
- LEGE posted a new ad in the Opportunity Integration Of Speciation Research : Workshop Announcement
- LEGE posted a new ad in the Opportunity Postdoctoral Position in Evolutionary Genomics and Bioinformatics, at the Center for...
- LEGE published a fun post Computational, but a Biologist !
- LEGE published a blog post Courses to Get You Started with Bioinformatics
New BLAST Core Nucleotide Database (core_nt)
By LEGE 747 days agohttps://ncbiinsights.ncbi.nlm.nih.gov/2024/07/18/new-blast-core-nucleotide-database/Cleaner BLAST Databases for More Accurate Results
By LEGE 859 days agoRemoving contaminated sequences using NCBI quality assurance toolsBlast on Docker, Google Cloud, Amazon Cloud
By LEGE 2243 days agoAs announced in a previous post, we offer a Docker version of NCBI BLAST+ that you can use locally or on the Google Cloud where we have pre-loaded BLAST databases. We are happy to announce that the same functionality is now available on the...
Jit
5557 points
5557 points
Jitendra Narayan
2644 points
2644 points
Rahul Nayak
2300 points
2300 points
Neel
1649 points
1649 points
BioStar
1297 points
1297 points
- By LEGE 718 days agoTo #uninstall #phonelink in window run it in poweshell: Get-AppxPackage Microsoft.YourPhone -AllUsers | Remove-AppxPackage
- By LEGE 815 days ago#NCBI is planning to push some updated on #taxonomy #classification https:/
/ ncbiinsights.ncbi.nlm.nih.gov/ 2024/ 06/ 04/ changes-ncbi-taxonomy-classifications/ - By LEGE 921 days agoWalk-in Bioinformatics interview @ https:/
/ cdri.res.in/ pdf/ recruitment/ Advt_01_2024_Project_Staff.pdf - By LEGE 968 days ago
Onliner to convert minimap2 to PAF
By LEGE 88 days agoPython script to find all possible repeats in a DNA string !
By LEGE 622 days agoPython script for treemap using Python's Plotly library
By LEGE 623 days ago
Computational, but a Biologist !
By LEGE 143 days agoThere was a time when doing biology meant working only with your hands— and that alone was seen as “real science.”A Bioinformatician’s Lament
By LEGE 458 days ago"I have a presentation tomorrow," they say, With hopeful eyes, like it’s all child's play. As if results bloom overnight, full-grown— Not wrangled from chaos, and error-prone.
WinPCA
By LEGE 341 days agogithub.com - A package for windowed principal component analysis. WinPCA performs principal component analyses (PCA) in sliding windows along chromosomes. Both hard-called genotypes (input: VCF or TSV) or genotype likelihoods (input: VCF, TSV or BEAGLE)...Termal: a fast and interactive terminal-based viewer for multiple sequence alignments
By LEGE 341 days agogithub.com - termal, a fast, interactive, terminal-based viewer for multiple sequence alignments (MSAs), designed for use on remote systems such as high-performance computing (HPC)...HiTE: a fast and accurate dynamic boundary adjustment approach for full-length Transposable...
By LEGE 344 days agogithub.com - HiTE is a Python software that uses a dynamic boundary adjustment approach to detect and annotate full-length Transposable Elements in Genome Assemblies. In comparison to other tools, HiTE demonstrates superior performance in detecting a...PeGAS: A Comprehensive Bioinformatic Solution for Pathogenic Bacterial Genomic Analysis
By LEGE 363 days agogithub.com - This is PeGAS, a powerful bioinformatic tool designed for the seamless quality control, assembly, and annotation of Illumina paired-end reads specific to pathogenic bacteria. This tool integrates state-of-the-art open-source software to provide a...
When Thousands of Bacterial Genomes Become One Giant Map
By LEGE 3 days agoDeveloped by Jérôme Arnoux and colleagues, PANORAMA is a computational tool designed to explore bacterial pangenomes—the complete collection of genetic possibilities found across a species or group of related organisms. Instead of looking at every...Courses to Get You Started with Bioinformatics
By LEGE 333 days agoBioinformatics is now at the heart of modern biology and medicine. From decoding genomes and predicting antimicrobial resistance, to developing personalized medicine and advancing evolutionary research, computational skills are no longer optional —...Top Journals in Bioinformatics: How to Choose Where to Publish & Why It Matters
By LEGE 338 days agoBioinformatics is a rapidly growing field at the intersection of biology, computer science, mathematics, and statistics. As data volumes increase, as well as the diversity of data types (genomics, proteomics, metabolomics, imaging, single‑cell data,...Trust But Verify: Sequencing Your Cell Lines Might Reveal an Uninvited Guest
By LEGE 452 days agoHigh-throughput sequencing has become indispensable in cell biology, enabling detailed insights into chromatin structure, gene expression, and regulatory dynamics. Yet, when faced with unexpectedly low mapping rates to the human genome,...
The Sheppard Lab
Category: Bioinformatics
PI: Samuel K. Sheppard, Professor in Pathogen Genomics & Evolution
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Libraries or management tools for high throughput sequencing data
Last updated 695 days ago by LEGEGATB Library. The Genome Analysis Toolbox with de-Bruijn graph. A large part of tools developed by the GenScale team are based on this library.These methods enable the analysis of data sets of any size on multi-core desktop...-
Bioinformatics Lecture Notes
Last updated 698 days ago by LEGEStudy Resources for ECM3413 - Bioinformatics Contents General Information Lecture Slides Past Exam Paper Continuous Assessments Suggested Reading List General Information This module runs in Semester 2. It is... -
Tools to access the quality of your assembled genome !
Last updated 751 days ago by LEGEFASTA VALIDATOR + SEQKIT RMDUP: FASTA validation GENOMETOOLS GT GFF3VALIDATOR: GFF3 validation ASSEMBLATHON STATS: Assembly statistics GENOMETOOLS GT STAT: Annotation statistics NCBI FCS ADAPTOR: Adaptor contamination pass/fail NCBI...
Question: How to downgrade the Perl
Question: Alienomics error, how to fix it !
Question: What is the p-value?
