Python script to create fastq file with random sequences
...lity(sequence_length) return f"@SEQ_ID\n{sequence}\n+\n{quality}\n" def generate_fastq_file(num_entries, sequence_length, file_path): with open(file_path, 'w') as f: for _...23 days ago
Python script to calculate basic genome stats !
...# Read the genome sequence from the FASTA file for record in SeqIO.parse(fasta_file, "fasta"):...print(f"GC Content: {gc_content:.2f}%") # Example usage fasta_file = "path/to/your/genome.fasta" calc...23 days ago
Python script to parse a FASTQ file !
#Python script to parse a FASTQ file and extract basic inform...iopython from Bio import SeqIO def parse_fastq(fastq_file): # Initialize a list to store parsed sequences sequences...uences # Example usage fastq_file = "path/to/your/sequences.fastq" p...23 days ago