Results for "UP"
Bio-Scripts
Installing Busco version 4.0.6
...nment location: /home/jit/anaconda3 added / updated specs: - busco=4.0.....10-h14c3975_0 The following packages will be UPDATED: libpng....0-hab1572f_1 The following packages will be SUPERSEDED by a higher-priority c...1480 days ago
- ...l) Counts reads in the input SAM/BAM GetPileupSummaries (BETA Tool) Tabulates pileup metrics for inferring contami...he header of a BAM file. AddOrReplaceReadGroups (Picard) Assign...
2102 days ago
- ...master -> origin/master Updating 9544316e..dc8811f8 Fas...| 2 +- lib/termsupport.zsh...| 4 +- plugins/emoji/update_emoji.pl...eme Current branch master is up to date. __...
2102 days ago
Perl script to break the contigs by 'N'
...$contig = $seqobj->display_id(); #gets contig sequence my $seq = $seqobj->seq; my $lenseq=length $seq; $seq = uc $seq; #now all bases are in uppercase #Searches for NNNN...2090 days ago
- library(vcfR) # Input the files. vcf
2087 days ago
Installing pb-assembly on Linux !
...Python/2.7.14-foss-2017b gnuplot/5.0.3-foss-2016a...Python/2.7.14-GCCcore-6.4.0-bare gnuplot/5.0.5-foss-2016b...2.19.1-py27_1 conda-forge setuptools: 40.4.3-py2...2061 days ago
- ...ples/ (denovo_asm) [jnarayan@hmem00 FALCON-examples]$ ../git-sym/git-sym update run/greg200k-sv2/ mkdir...Time Time Time Current Dload Upload Total Spent Left...
2061 days ago
- #http://www.nupack.org/downloads/source ➜ tools git:(master) ✗ cd nupack3.0.6 ➜ nupack3.0.6 git:(...pes -Wmissing-declarations -DNUPACK_SAMPLE -I../../../src/sha...pes -Wmissing-declarations -DNUPACK_SAMPLE -I../../../src/sha...~~~~~~~~~~~~~~~~~~~~~~ cc -DNUPACK_SAMPLE -std=c99 -O3 -Wall...
2053 days ago
- ...e#2.sam htslib-1.9/test/ce#5.sam htslib-1.9/test/ce#5b.sam htslib-1.9/test/ce#5b_java.cram htslib-1.9/test/ce#large_seq.sam htslib-1.9/test/ce#supp.sam htslib-1.9/test/ce#tag_...
2046 days ago
Installing Platypus on Ubuntu !
...Processing triggers for mime-support (3.60ubuntu1) ... Proces...ailable. You should consider upgrading via the 'pip install -...m/ctabix.c' Cython extension (up-to-date) building 'ctabix' e...he following packages will be UPDATED: ca-certificates:...2046 days ago
