1579 days ago
Perl script to delete the adjacent repeats !
/usr/bin/perl #Mostly the interview question for bioinfomatician ! #Write a code to delete the adjacent repeated character .... $string='ATTTTTTGGC'; # This should be c...1579 days ago
Install python pip and numpy on Linux / Ubuntu
...-db (2.8.3-2ubuntu0.1) ... jit@jit-HP-Pro-3335-MT:~/Downloads/MitoHunter$ pip install numpy Collecting numpy Downloading https://files.pythonhosted.org/packages/3a/5f/47e578b...1578 days ago
Installing ggplot2 and its dependencies on Ubuntu !
...how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, o...a.out checking for suffix of executables... checking whether we are cross compiling... no checking fo...1578 days ago
1575 days ago
To convert just one specific read group to fastq
...{} # Create a directory for bam files mkdir -p bam # Generate a separate BAM file for each SAMPLE. cat selected.txt | parallel "picard FastqToSam F1=reads/{}_1.fastq F2=read...1571 days ago
Install python-numpy python-scipy python-matplotlib on Ubuntu !
$MT:~/Downloads/chaos$ sudo apt-get install python-numpy python-scipy python-matplotlib Reading...onfigobj python-excelerator python-gobject python-matplotlib-doc python-nose python-qt4 python-sip python...1570 days ago
1568 days ago
1567 days ago
Install Parrot Virtual Machine !
.......done. auto::arch - Determine CPU architecture and type, and OS........done. auto::cpu -...d a keystroke before starting --runtime-prefix -v --verbose -E --pre-process-only...1565 days ago