Computational Proteomics : Lets remember the basics
I spend some of my valuable time in computational drug designing sector. I remember my initial proteomics days, playing with interactive protein vis...3516 days ago
List of gene ontology software and tools
The Gene Ontology (GO) is a set of associations from biological phrases to specific gen...ANSFAC motifs to a user-specified group of genes, proteins or microarray probes. g:GOSt...MetaCore is based on a curated database of human protein-pro...3738 days ago
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Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has hindered thus far t...ic prediction of trans-membrane (TM) protein structure. While algorithm fo...equences in a standard dataset of 86 proteins wi...3973 days ago
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how could be a molecular dynamics be helpful studying the protein's conformation
give your views3516 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project provides an inte...3976 days ago
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Vaccination can be dangerous sometimes !!!
It is always believed that vaccination is permanent cure from specific diseases, but recent finding suggest somethi...ome of those antibodies also targeted the stem of H1N1’s haemagglutinin protein, he...3923 days ago
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a network of 13 laboratories of the Paris-Saclay S...al to establish a link between sequence variation, functional variation, gene/protein exp...3977 days ago
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The Centre for Bioinformatics (MCB) Lab
The Centre for Bioinformatics (MCB) is a diverse collection of professors, postdoctoral fellows, and students, wh...ncer. We have worked on probabilistic models for subcellular localization, protein-protein int...3976 days ago
The Best Bioinformatics / Computational Biology Quotes
Bioinformatician are not anti-social; We are just genome friendly. Bioinformatician would love to change the bio...be the next curator! Beware of computational biologist they screw genes and protein. W...3748 days ago
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Computer Theory & Genetics: George Chao at TEDxUMNSalon
George Chao is an undergraduate senior studying Genetics and Computer Science at the University of Minnesota. Havin...developmental genetics in Drosophila, computational techniques for analyzing protein int...3944 days ago
Parse a genbank file using regular expressions
#! /usr/local/bin/perl -w $genbank = "genbank_file.txt"; open (GENBANK, $genbank) || die "can...$cds_end\n"; } elsif (/(\/translation=")(.*)/) { # protein product begins print "Translation: "; $protein = $...2945 days ago
Retrieve NCBI GenBank records with a range of accession numbers
#!/usr/bin/perl #FILE: ncbi_search.pl #AUTH: Paul Stothard (paul.stothard@gmail.com) use warnings; use strict; use Getopt::Long; use LWP::Simple; use URI::Esca...2944 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...nformatics specialist at the faculty of Gene Engineering and Biotechnology Institu...rofile. Alterations in the gene, transcript, protein, and metabolite profiles betw...action between the prokaryotic two-component proteins. To be able to accurately predic...2390 days ago
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Genetic Modified (GM) Food/Organisms
An organism that is generated through genetic engineering is considered to be a genetically modified organism (GMO). The first GMOs were bacteria in 1973; GM mice were generated in 1974. Insuli...3947 days ago