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Results for "Genome Sequence"

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• • Jit@jit.aber

  

  Understanding N50 http://jermdemo.blogspot.be/2008/11/calculating-n50-from-velvet-output.html #N50 #Assembly #Genome #Contigs

  2854 days ago

• • Shruti Paniwala@shruti

  

  Coverage R Plot http://davetang.org/muse/2013/09/07/creating-a-coverage-plot-in-r/ #R #Plot #Genome #Image #NGS #BAM

  2808 days ago

• • Shruti Paniwala@shruti

  

  Extract a fasta sequence from multifasta file: samtools faidx multitest.fa and then samtools faidx multitest.fa fasta_id > out.fa #Samtools #Fasta #Extract #Multifasta

  2807 days ago

• • Jit@jit.aber

  

  Mammalian Meiotic Recombination: A Toolbox for Genome Evolution http://www.karger.com/Article/FullText/452822 #Mammals #Genome #Breakpoints #Evolution #Recombination

  2758 days ago

• • Bulbul@bulbul

  

  Python exercise: Genome assembly https://munch-lab.org/2013/11/29/exercise-genome-assembly/ #Python #Assembly #Problems #Assembly

  2750 days ago

• • Shruti Paniwala@shruti

  

  Fasta sequence length: awk '/^>/ {if (seqlen){print seqlen}; print ;seqlen=0;next; } { seqlen += length($0)}END{print seqlen}' file.fa #Length #Linux #OneLiner

  2718 days ago

• • Surabhi Chaudhary@surabhi

  

  Basics for assembly http://ged.msu.edu/angus/files/lecture4-mapping.pdf #Genome #Mapping #Assembly #PPT

  2688 days ago

• • Jit@jit.aber

  

  AVID: A Global Alignment Program https://www.ncbi.nlm.nih.gov/pmc/articles/PMC430967/ #AVID #Alignment #Global #Sequence #Genome

  2686 days ago

• • Jit@jit.aber

  

  Whole-Genome Sequencing (WGS) PPT http://www.bx.psu.edu/~ratan/Sequence%20Analysis.pdf #PPT #WGS #Ratan

  2680 days ago

• • Jit@jit.aber

  

  Steps for #Prokaryotic #genome #assembly and #annotation http://www.edamamecourse.org/docs/metagenome_assembly_and_annotation.html

  2676 days ago

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