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• • Jit@jit.aber

  

  samtools view -f 256 Input.bam | awk '$6 ~/S/ && $7 == "=" {print $0}' > Secondary_clipped.sam

  2357 days ago

• • Jit@jit.aber

  

  Jitter Plot in R http://r-statistics.co/Top50-Ggplot2-Visualizations-MasterList-R-Code.html#Jitter%20Plot #Plot #Jitter #R #Rscript

  2245 days ago

• • Jit@jit.aber

  

  #N50 = contig length so that half of the contigs are longer and 1/2 of contigs are shorter

  2242 days ago

• • Rahul Nayak@rahul

  

  PacBio Sequencing and Its Applications https://www.sciencedirect.com/science/article/pii/S1672022915001345 #PacBio #Application #NGS

  2231 days ago

• • Jit@jit.aber

  

  PacBio genome assembly tools https://academic.oup.com/bib/advance-article/doi/10.1093/bib/bbx147/4590140 #PacBio #Assembly #Tools #SMRT #LongReads

  2221 days ago

• • Jit@jit.aber

  

  Genome Assembly: #Scaffolding Guided by Related Genomes https://www.duo.uio.no/bitstream/handle/10852/37431/Furenes_Master.pdf?sequence=1

  2210 days ago

• • Aaryan Lokwani@aaryan

  

  export PERL5LIB=/home/foobar/code #SetPath #Perl

  2207 days ago

• • Jit@jit.aber

  

  #tBLASTn #command line $ tblastn -query Avaga.pep.out.45.fa -db myDB -outfmt 6 -out output_file -evalue 1e-5 -max_target_seqs 1 #Blast #Protein

  2202 days ago

• • Rahul Nayak@rahul

  

  Useful #tools for #genome analysis https://gigascience.biomedcentral.com/articles/10.1186/s13742-015-0077-2

  2185 days ago

• • Abhimanyu Singh@abhimanyu

  

  Efficiency of #PacBio long read #correction by 2nd generation #Illumina sequencing https://www.sciencedirect.com/science/article/pii/S0888754317301660

  2130 days ago

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