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• • Jit@jit.aber

  

  Remove the blank space from a fasta file. perl -nlwe 'tr/ //d; print if length' fileName #Delete #Space #Fasta #Perl #Oneliner

  3663 days ago

• • Aaryan Lokwani@aaryan

  

  List of bioinformatics companies worldwide http://grouthbio.com/Genome_Software_Service.php #Companies #Worldwide #Bioinformatics #List #Name

  3669 days ago

• • John Parker@parker

  

  Bacterial genome assembly tips using Valvet http://pathogenomics.bham.ac.uk/blog/2009/09/tips-for-de-novo-bacterial-genome-assembly/ #Assembly #NGS #Bacteria #Genome #Tricks #Tips #Velvet

  3669 days ago

• • santosh pal@santoshpal

  

  Load the ShortRead and BiocParallel packages for NGS data analysis in R #bioconductor #R #qualitycheck

  3668 days ago

• • Jitendra Narayan@admin

  

  Creates 100 random DNA sequences with 20 residues. sapply(1:100, function(x) paste(sample(c("A","T","G","C"), 20, replace=T), collapse="")) #R #Random #Sequence #DNA #Script

  3667 days ago

• • Jitendra Narayan@admin

  

  R getting strong for NGS analysis http://manuals.bioinformatics.ucr.edu/home/ht-seq #Packages #NGS #R #Bioconductor #Bowtie #Sequence #Analysis #SNP

  3667 days ago

• • Jitendra Narayan@admin

  

  Love to ping nucleosome positioning using PING 2.0 http://bioinformatics.oxfordjournals.org/content/29/16/2049.abstract #Nucleosome #Position #Chromosome #R #Package #Bioconductor

  3666 days ago

• • Jit@jit.aber

  

  Force install a Perl module sudo PERL_MM_USE_DEFAULT=1 perl -MCPAN -e "CPAN::Shell->force(qw(install Nginx::Log::Entry))" #Perl #Install #Force #CPAN #Module

  3664 days ago

• • Rahul Agarwal@raag

  

  Patent-free Research!!http://www.nature.com/nm/journal/v20/n6/full/nm0614-564.html #OpenSource #Research

  3660 days ago

• • Jit@jit.aber

  

  Count the number of "pattern" occurrence in a file grep -o 'pattern' anc.annots.gff | wc -l #Linux #grep #Count #Number #Occurrence

  3658 days ago

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