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• • Jit@jit.aber

  

  Just_Annotate_My_proteins (JAMp) http://jamps.sourceforge.net/ #Protein #Annotate #JAMp

  2655 days ago

• • Abhimanyu Singh@abhimanyu

  

  Database of BioSamples http://www.ezbiocloud.net/ #Classification #Bio #Genes #Species #Taxonomy

  2627 days ago

• • Jit@jit.aber

  

  Genome of interest Bacillus amyloliquefaciens https://www.ncbi.nlm.nih.gov/genome/genomes/848 #Bacteria

  2575 days ago

• • Jit@jit.aber

  

  #Target 4 and #HSPS 1 with #blast $ blastn -task megablast -query brkSeq.fa -db myDBAvaga -evalue 1e-5 -num_threads 1 -max_target_seqs 4 -max_hsps 1 -outfmt '6' -out output

  2572 days ago

• • Jit@jit.aber

  

  Print each command before executing? Bash script to print each command before executing. $ bash -x myscript.sh #Print #Command #Bash

  2500 days ago

• • Neelam Jha@neelam

  

  Store all files in a array using perl: my @filesbwa = <$base_name/reads/$base_name.$library.bwa.*fa> #Store #Keep #Array #Perl

  2370 days ago

• • Jit@jit.aber

  

  Glob multiple files in Linux with Perl. my @soundfiles = grep {/\.(wav|mid|mp3|rm|ogg)$/i} glob("*"); #Perl #Linux #Glob

  2256 days ago

• • Poonam Mahapatra@poonam

  

  Convert fasta to 2bit $ faToTwoBit myAssembly.fa myAssembly.2bit #Fasta #2bit #Convert

  2210 days ago

• • Poonam Mahapatra@poonam

  

  Convert 2bit to psl $ blat myAssembly.2bit -oneOff=0 -noHead myQueryContigSeqs.fa myHits.psl #Convert #psl #2bit #blat

  2210 days ago

• • Jit@jit.aber

  

  perl -e '$/="\n>"; while (<>) { s/>//g; my ($id, $seq) = split /\n/; print ">$_" if length $seq; }' < all_p_ctg.fasta > all_p_ctg_corrected.fasta #Convert #Fasta #Zero

  2166 days ago

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