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Results for "
File
"
Wire posts
Rahul Nayak
@rahul
Split a multi-FASTA
file
into individual FASTA
file
s: awk '/^>/{s=++d".fa"} {print > s}' multi.fa #split #multifasta
1992 days ago
BioJoker
@biojoker
To know about the
file
detail $
file
.face #
file
#detail
1988 days ago
BioJoker
@biojoker
Find the
file
$ locate xgenome or locate fstab #bash #locate
1988 days ago
BioJoker
@biojoker
Write in a
file
in bash $ cat >>
file
then ctrl+d to exit #bash #cat #write
1988 days ago
BioJoker
@biojoker
Read a
file
in terminal $ less
file
2 #bash #less
1988 days ago
Rahul Nayak
@rahul
This script will #extract the intron feature #gff3 and sequence from gene_exon gff3 and fasta
file
. Extract-intron-from-gff3
1976 days ago
Rahul Nayak
@rahul
One liner to remove the description information from a fasta
file
and just keep the identifier $ perl -p -i -e 's/>(.+?) .+/>$1/g' sample1.fa #clean #header #fasta
1965 days ago
Jit
@jit.aber
The command du "summarizes disk usage of each
FILE
, recursively for directories," e.g., du -h | sort -h #Disk #Usage #Linux
1910 days ago
Rahul Nayak
@rahul
Grep a term from a
file
in Linux. $ grep -A1 "term" input.fasta > output.fasta #Grep #Term
1653 days ago
Jit
@jit.aber
Sort and get the best first of duplicated lines $ sort -k3rn
file
| sort -u -k1,1 #Sort #Duplicated #Value
1438 days ago
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