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Comment on "Run miniasm assembler on nanopore reads !"
minimap2 –x ava-ont \ ../../trimming_practical/nanofilt/nanofilt_trimmed.fastq \ ../../trimming_practical/nanofilt/nanofilt_trimmed.fastq \ | gzip -1 > ./...843 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...into a single file prior to running minimap. minimap2 -x ava-pb -t 23 \ 20170911_o...0170911_oly_pacbio_cat.fastq \ > 20170911_minimap2_pacbio_oly.paf 2 Run miniasm...gs are required for Racon assembly (Step 5). minimap2 \ -t 23 \ 20170918_oly_pacb...2214 days ago
Comment on "Run miniasm assembler on nanopore reads !"
urbe@urbo214b[allONT] minimap2 -xava-ont both.fastq both.fastq -t20 -X > AONT.paf [][M::mm_idx_gen::...8*18.58] mapped 45017 sequences[M::main] Version: 2.3-r531[M::main] CMD: minimap2 -xava-ont -t20 -X both.fastq...2328 days ago
