Comment on "Bioinformatics Jokes !!"
Someone ask a bioinformatician how to open the "Jar"? He suggested to download and install Java first. ;)1953 days ago
Comment on "Indexcov: fast coverage quality control for whole-genome sequencing"
Installing goleft ➜ falconUnzip_assembly bioconda install goleftzsh: command not found: bioconda➜ falconUnzip_assembly conda install goleft Solving environment: d...0.4 MB The following NEW packages will be INSTALLED: goleft: 0.1.18-1 bioconda...2119 days ago
Comment on "Installing Perl environment on Linux"
You migth need to install this sudo conda install -c bioconda perl-app-cpanminus2169 days ago
Comment on "Installing Perl environment on Linux"
...ollowing NEW packages will be INSTALLED: libgcc: 7.2.0-h69d50b8_2...vel-0.2800 ... OKSuccessfully installed Sub-Uplevel-0.2800Building...ild-0.4224 ... OKSuccessfully installed Module-Build-0.4224Configur...ption-0.43 ... OKSuccessfully installed Test-Exception-0.43--> W...2169 days ago
Comment on "Installing Perl environment on Linux"
curl -L http://cpanmin.us | perl - --sudo App::cpanminus The above is installing the "zero configuration CPAN modules installer" called cpanm. (Can take several minutes to install - don't break the process) and after - simply: cpanm Foo cpanm Module::One cpanm Another::Module2169 days ago
Comment on "poRe: an R package for the visualization and analysis of nanopore sequencing data"
We now need to install the poRe dependencies in...g/biocLite.R") biocLite("rhdf5") install.packages(c("shiny","bit64","d...) q() R may ask if you want to install into a local library, just sa...t the Linux command line: R CMD INSTALL poRe_0.16.tar.gz The fastq...2217 days ago
Comment on "SPAdes hybrid genome assembly"
...d/contigs.fasta NODE_1_length_4620446_cov_135.169_ID_22238 > single_contig.fa Finally, a quick comparison to the reference: sudo apt-get install mummer curl -s "http://euti...2217 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
Install cpanm to make installing other modules easier (you'll thank us later). You need to type these commands into a Terminal emulator (Mac OS X, Win32, Linux) cpan App::cpanminus Now install any module you can find. cpanm Module::Name2261 days ago
Comment on "Perl Module Installation"
tar zxf Digest-SHA1-2.13.tar.gz cd Digest-SHA1-2.13 perl Makefile.PL make make test make install2281 days ago
2601 days ago