Computational Proteomics : Lets remember the basics
I spend some of my valuable time in computational drug designing sector. I remember my initial proteomics days, playing with interactive protein visualization software and dr...3520 days ago
List of gene ontology software and tools
The Gene Ontology (GO) is a set of associations from biolog...RANSFAC motifs to a user-specified group of genes, proteins or microarray probes. g:GOSt.... MetaCore is based on a curated database of human protein-protein, protein-DNA interact...3742 days ago
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Master Thesis: Trans-membrane topology prediction through Markov based decoders
...information on alpha helical membrane protein (MPs) has hindered thus far th...automatic prediction of trans-membrane (TM) protein structure. While algorithm for...n single sequences, our trans-membrane MM, correctly predicts the e...side (inner side), and trans-membrane part. The closed association...3977 days ago
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how could be a molecular dynamics be helpful studying the protein's conformation
give your views3521 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, datab...3980 days ago
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Vaccination can be dangerous sometimes !!!
...stem of that virus’s haemagglutinin. But some of those antibodies also targeted the stem of H1N1’s haemagglutinin protein, helping that virus fuse to cell membranes. That made H1N1 more effici...3927 days ago
DNA Bending Propensity in the Presence of Base Mismatches: Implications for DNA Repair
Understanding how the human body recognizes damaged DNA and...ogy at Michigan State University. Feig studies the proteins MutS and MSH2-MSH6, which re...nitiate DNA repair. Natural DNA repair occurs when proteins like MutS (the primary prote...3944 days ago
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a network of 13 labor...al to establish a link between sequence variation, functional variation, gene/protein expression and phenotypic ada...3981 days ago
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The Centre for Bioinformatics (MCB) Lab
The Centre for Bioinformatics (MCB) is a diverse collection of professors, postdocto...ncer. We have worked on probabilistic models for subcellular localization, protein-protein interactions, and problems re...3981 days ago
The Best Bioinformatics / Computational Biology Quotes
Bioinformatician are not anti-social; We are just genome friendly. Bioinformatician...be the next curator! Beware of computational biologist they screw genes and protein. Warning! Your genome is ful...3753 days ago
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Computer Theory & Genetics: George Chao at TEDxUMNSalon
George Chao is an undergraduate senior studying Genetics and Computer Science at the U...developmental genetics in Drosophila, computational techniques for analyzing protein interactions, and helping wit...3948 days ago
Parse a genbank file using regular expressions
#! /usr/local/bin/perl -w $genbank = "genbank_file.txt"; open (GE...- $cds_end\n"; } elsif (/(\/translation=")(.*)/) { # protein product begins print "Translation: "; $protein = $2; $trans = 1;...2950 days ago
Retrieve NCBI GenBank records with a range of accession numbers
#!/usr/bin/perl #FILE: ncbi_search.pl #AUTH: Paul Stothard (paul.stothard@gmail.com) use warnings; use strict; use Getopt::Long; use LWP::Simple; use URI::Es...2949 days ago
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the...this profile. Alterations in the gene, transcript, protein, and metabolite profiles betw...interaction between the prokaryotic two-component proteins. To be able to accurately pr...2395 days ago
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Interview Mark Sansom (U. Oxford): Simulations of Membrane Proteins
Workshop in Bioinformatics, 4/June/2012 Campus Vida's Research Centers organize in Santiago de Compostela the Workshop in Bioinformatics. This event addressed issues such as structural bioinformatics, biological modelling and mining bioinformatics data. Professor Mark Sansom (University of Oxford...Tags: Mark Sansom, Membrane Protein, Oxford
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