Results for "C"
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Comment on "Ten International Scholarships for Indian Biotechnology and Bioinformatics Students"
The Malaysia International Scholarship (MIS) is an initiative by the Malaysian Government to attract the best brain from around the world to pursue advanced academic studies in Malaysi...act, motivate and retain talented human capital from abroad. http://...2326 days ago
Comment on "List of Bioinformatics Vacancy, Jobs, Opportunity websites"
Jobs at new zealand https://careers.sciencenewzealand.org/home2329 days ago
Comment on "Run miniasm assembler on nanopore reads !"
Must read paper https://genome.cshlp.org/content/27/5/737.full2347 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...(the ava-pb in the code below) for analyzing PacBio data. Minimap only accepts...sequencing files, you have to concatenate them into a single...ple provided in the miniasm documentation; there are other op...p2 \ -t 23 \ 20170918_oly_pacbio_miniasm_reads.fasta 201709...2347 days ago
Comment on "poRe: an R package for the visualization and analysis of nanopore sequencing data"
...ll the poRe dependencies in R, which is very easy: R source("...you want to install into a local library, just say Y and acc...0.16.tar.gz The fastq extraction scripts for poRe are in g...old_format”: ./poRe_scripts/old_format/extract2D MAP...2354 days ago
Comment on "SPAdes hybrid genome assembly"
...ife of genome assembly tools, and by default includes read correction. This takes up...o SPAdes_hybrid & Use samtools to extract the top contig: head -n 1...a Finally, a quick comparison to the reference: sudo apt-get install mum...2354 days ago
- Canu is one of the best de...est run in parallel, making HPC integration essential. This c...-d <assembly-directory> \ genom...bled. It is used mostly to compute coverage in reads. Fra...ould be used in the metagenomics practical (hint!) Now try t...
2355 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...ng and (ii) assembly. Designed for long, noisy reads, they do not have a correction or consensus step, and th...100 -m0 -t8 reads.fq reads.fq | gzip -1 > reads.paf.gz Then we can assemble miniasm -f re...2355 days ago
- This made me think of Perl https://benchmarksgame-team.pages.debian.net/benchmarksgame/faster/perl.html . #PerlLove
2361 days ago
Comment on "List of genome announcement, notes and reporting journals"
Genomics data also accept draft genome assembly papers https://www.sciencedirect.com/journal/genomics-data2362 days ago
