Comment on "Ten International Scholarships for Indian Biotechnology and Bioinformatics Students"
The Malaysia International Scholarship (MIS) is an initiative by the Malaysian Government to attract the best brain from around the world to pursue advanced academic studies in Malaysi...act, motivate and retain talented human capital from abroad. http://...2383 days ago
Comment on "List of Bioinformatics Vacancy, Jobs, Opportunity websites"
Jobs at new zealand https://careers.sciencenewzealand.org/home2385 days ago
Comment on "Run miniasm assembler on nanopore reads !"
Must read paper https://genome.cshlp.org/content/27/5/737.full2403 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...(the ava-pb in the code below) for analyzing PacBio data. Minimap only accepts...sequencing files, you have to concatenate them into a single...ple provided in the miniasm documentation; there are other op...p2 \ -t 23 \ 20170918_oly_pacbio_miniasm_reads.fasta 201709...2403 days ago
Comment on "poRe: an R package for the visualization and analysis of nanopore sequencing data"
...ll the poRe dependencies in R, which is very easy: R source("...you want to install into a local library, just say Y and acc...0.16.tar.gz The fastq extraction scripts for poRe are in g...old_format”: ./poRe_scripts/old_format/extract2D MAP...2410 days ago
Comment on "SPAdes hybrid genome assembly"
...ife of genome assembly tools, and by default includes read correction. This takes up...o SPAdes_hybrid & Use samtools to extract the top contig: head -n 1...a Finally, a quick comparison to the reference: sudo apt-get install mum...2410 days ago
2411 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...ng and (ii) assembly. Designed for long, noisy reads, they do not have a correction or consensus step, and th...100 -m0 -t8 reads.fq reads.fq | gzip -1 > reads.paf.gz Then we can assemble miniasm -f re...2411 days ago
2417 days ago
Comment on "List of genome announcement, notes and reporting journals"
Genomics data also accept draft genome assembly papers https://www.sciencedirect.com/journal/genomics-data2418 days ago
