2179 days ago
Comment on "Ten International Scholarships for Indian Biotechnology and Bioinformatics Students"
The Rhodes Scholarships for India Each year, there are five Scholarships available for India. https://www.rhodeshouse.ox.ac.uk/scholarships/apply/india2188 days ago
Comment on "Ten International Scholarships for Indian Biotechnology and Bioinformatics Students"
...dvanced academic studies in Malaysia. This scholarship aims to support Malaysian Government's effort to attract, motivate and retain talented human capital from abroad. http://ww...2188 days ago
Comment on "Run miniasm assembler on nanopore reads !"
Must read paper https://genome.cshlp.org/content/27/5/737.full2209 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...r analyzing PacBio data. Minimap only accepts two FASTQ files...le file prior to running minimap. minimap2 -x ava-pb -t 23 \...astq /home/data/20170911_minimap2_pacbio_oly.paf > /home/da...q \ 20170918_oly_pacbio_minimap_mappings.paf \ 20170918_oly_...2209 days ago
Comment on "poRe: an R package for the visualization and analysis of nanopore sequencing data"
...e 2D sequence data as FASTQ from the MinION data. Nick’s SQK-MAP-006 data are in the old FAST5...ript in “old_format”: ./poRe_scripts/old_format/extract2D MAP006-1/MAP006-1_downloads/pass/...2216 days ago
Comment on "SPAdes hybrid genome assembly"
...PAdes_hybrid/contigs.fasta NODE_1_length_4620446_cov_135.169_ID_22238 > single_contig.fa Finally, a quick comparison to the reference: sudo apt-get install mummer curl -s...2216 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...d this to assemble the genome using ONT (nanopore reads) Minimap and miniasm are ultrafast tools for (i) mapping and (ii) assembly. Design...rrors) We start with an all against all comparison: minimap -Sw5 -L100 -m0 -t8 reads.fq r...2217 days ago
Comment on "List of genome announcement, notes and reporting journals"
Genomics data also accept draft genome assembly papers https://www.sciencedirect.com/journal/genomics-data2224 days ago
Comment on "How to install Perl modules on Mac OS X in easy steps !!"
Our Perl script for drawing requires the GD module(2.41 or later version). Moreover, the GD module requires the following packages. The gd graphics library The PNG graphics libraryThe zlib compression library2231 days ago