Barrnap: Bacterial ribosomal RNA predictor
Barrnap predicts the location of ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S). It takes F...2547 days ago
SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis
SHAMAN is a shiny application for differential analysis of metagenomic data (16S, 18S, 23S, 28S, ITS and WGS) including bioinformatics treatment of raw reads for targeted metagenomi...1355 days ago
Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases !
...'third_party_DB/taxdump' ); #Install silvaDB #https://www.arb-silva.de/no_cache/download/archive/release_138_1/Exports/ #LSU: Large subunit (23S/28S ribosomal RNAs) #SSU: Sm...1158 days ago