Results for "BBMap/BBTools package"
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RCircos: an R package for Circos 2D track plots
RCircos package provides a simple and flexible way to make Circos 2D track plots with R and could be easily integrated into other R data processing and graphic manipulation...2903 days ago
- Stampy is a package for the mapping of short reads from illumina sequencing machines onto a reference genome. It's recommended for most workflows, including those for genom...
2902 days ago
- methylKit is an R package for DNA methylation analysis and annotation from high-throughput bisulfite sequencing. The package is designed to deal with sequ...
2889 days ago
- The Genome Assembly Evaluation Metrics and Reporting (GAEMR) package is an assembly analysis frame...
2878 days ago
- statistical analysis and visulization of functiona...conductor version: Release (3.3)This package implements methods to analyze...(2012). “clusterProfiler: an R package for comparing biological them...284-287.InstallationTo install this package, start R and enter:## try htt...
2875 days ago
- Reads simulator Wgsim is a small tool for simulating sequence reads from a reference geno...accuracy of a mapper or a SNP caller with wgsim_eval.pl that comes with the package....
2869 days ago
- The programs are listed in alphabetical order, Look at the individual applications or go to the GROUPS page to search by category. EMBASSY applications are described in separate documentation for each package. Applications in the current release
2835 days ago
- Bambus 2.0, the second generation Bambus scaffolder available as an open source package. While most other scaffolders...
2815 days ago
- RepeatModeler is a de-novo repeat family identification and modeling package. At the heart of RepeatModeler are two de-novo repeat finding programs ( RECON and RepeatScout ) which employ complementary co...
2813 days ago
- Most variant calling pipelines result in files containing large quantities of variant info...s an attempt to remove false positives or otherwise problematic sites. The R package vcfR provides tools to facili...
2812 days ago
