BOL

Results for "BLAST"

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• • Shruti Paniwala@shruti

  

  BEAP: Blast Extension and Assembly Program

  The Blast Extension and Assembly Program (BEAP) is a computer program that uses a short starting DNA fragment, often a EST or partial gene segment, as "primer", to recursively blast nucleotide databases in an attempt to obtain all sequences that overlaps, directly or indirectly, with the "primer"...

  Tags: BEAP, Blast, Extension, Assembly, Program, Extend, Contigs, Sequence

  2149 days ago

• • Jit@jit.aber

  

  #tBLASTn #command line $ tblastn -query Avaga.pep.out.45.fa -db myDB -outfmt 6 -out output_file -evalue 1e-5 -max_target_seqs 1 #Blast #Protein

  Tags: tBLASTn, command, Blast, Protein

  2133 days ago

• • BioJoker@biojoker

  

  Alignment algorithms http://vlab.amrita.edu/?sub=3&brch=274&sim=1431&cnt=1 #Alignments #Algo #Blast

  Tags: Alignments, Algo, Blast

  1966 days ago

• • Abhimanyu Singh@abhimanyu

  

  KOALA: KEGG's internal annotation tool for K number assignment of KEGG GENES using SSEARCH computation

  KOALA (KEGG Orthology And Links Annotation) is KEGG's internal annotation tool for K number assignment of KEGG GENES using SSEARCH computation. BlastKOALA and GhostKOALA assign K numbers to the user's sequence data by BLAST and GHOSTX searches, respectively, against ...

  Tags: KOALA, KEGG, annotation, tool, assignment, KEGG, GENES, SSEARCH, computation, Bacteria, Blast

  1965 days ago

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