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Results for "Barrnap"

Blogs

• • Abhinav@abhinav

  

  Tools for RNA classification

  barrnap - https://github.com/tseemann/barrnap CPAT - https://github.com/liguowang/cpat, http://lilab.research.bcm.edu/ (web server) CPC2 - https://git...

  546 days ago

Bookmarks

• • Abhimanyu Singh@abhimanyu

  

  Barrnap: Bacterial ribosomal RNA predictor

  Barrnap predicts the location of ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S...

  2551 days ago

Bio-Scripts

• • Jit@jit.aber

  

  Install prokka using conda !

  (JitMetaENV) ➜ assembly conda install -c bioconda prokka Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen so...

  1217 days ago

Tags

• • Abhimanyu Singh@abhimanyu

  

  Barrnap: Bacterial ribosomal RNA predictor

  Barrnap predicts the location of ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S). It takes FASTA DNA sequence as input, and write GFF3 as output. It uses the new NHMMER tool that comes with HMME...

  Tags: Bioinformatics, RNA, Barrnap, 5S, 23S, 16S

  2551 days ago