BOL: Results for "Binning"

Results for "Binning"

- Jit@jit.aber
MetaBAT: An Efficient Tool for Accurately Reconstructing Single Genomes from Complex Microbial Communities
...sequences to deconvolute complex microbial communities, or metagenome binning, enables the study of individ...isms and their interactions. Here we developed an automated metagenome binning software, called MetaBAT, whi...
2609 days ago
- Jit@jit.aber
MyCC: Accurate binning of metagenomic contigs via automated clustering sequences using information of genomic signatures and marker genes
MyCC, an automated binning tool that combines genomic signatures, marker genes and optional contig coverages within one or multiple samples, in order to visualize the metagenomes and to identify the reconstructed genomic fragments. More at http://www.nature.com/articles/srep24175
2612 days ago
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- Jit@jit.aber
Genome Assembly Tools and Software - PART1 !!
..., file format conversion and mutation detection. COCACOLA – Binning Metagenomic Contigs using Seq...ment, and Paired-end Read LinkAge COCACOLA: a general framework for binning contigs in metagenomic studie...
2677 days ago
- Poonam Mahapatra@poonam
BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries
BBSplit internally uses BBMap to map reads to multiple genomes at once, and determine which genome they match best. This is different than with ordinary mapping. If a g...
2306 days ago

- Jit@jit.aber
Scripts required to calculate tetramer frequencies and create input files for ESOM https://github.com/tetramerFreqs/Binning #Bin #Tetramer
2609 days ago
- Jit@jit.aber
#NLP-MeTaxa: A Natural Language Processing Approach for #Metagenomic #Taxonomic #Binning Based on Deep Learning https://github.com/padriba/NLP_MeTaxa/
969 days ago

- Jit@jit.aber
Installing Porechop on Ubuntu !
...ADS Number of threads to use for adapter alignment (default: 16) Barcode binning settings: Control the binning of reads based on barcodes (i...
2098 days ago