Results for "Biological Networks"
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This is a comprehensive update to Shaun Purcell's PLINK command-line program, developed by Christopher Chang with support from the NIH-NIDDK's Laboratory of Biologic...2759 days ago
Statistical for biological research
There is no disputing the importance of statistical analysis in biological research, but too often it is considered only after an experiment is completed, when it may be too late. This...2753 days ago
Finding Patterns in Biological Sequences
In this report we provide an overview of known techniques for discovery of patterns of biological sequences (DNA and proteins). We also provide biological motivation, and methods of biological verification of such patterns. Fi...2703 days ago
- Motif based sequence analysis suits The MEME Suite allows the biologist to discover novel motifs in collections...s (Tomtom), finding preferred spacings between motifs (SpaMo), predicting the biologic...
2703 days ago
- The hive plot is a rational visualization method for drawing networks. Nodes are mapped to and posi...tablish a new baseline for visualization of large networks — a method that is both...
2647 days ago
- This website and accompaning documents are intended as a tool to help researchers dealing with non-model organisms acq...tissue collection, sample preparation and computer setup, through addressing biologic...
2602 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datas...s for large-scale functional and annotation datasets ChromHMM facilitates the biologic...2586 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we...resource for curated gene sets and a search engine that accumulates biological knowledge for further biologic...2578 days ago
- FASTQ format is a text-based format for storing both a biological sequence (usually nucleotide sequence) and its corresponding quality scores. Both the sequence letter a...
2572 days ago
CHSMiner: a GUI tool to identify chromosomal homologous segments
Background The identification of chromosomal homologous segments (CHS) within and between genomes is essential for...ve visualization of the results. We tested the software on both simulated and biologic...2372 days ago
