CLARK: Fast, accurate and versatile sequence classification system
CLARK, a method based on a supervised sequence classifica...e of a finished assembly for the reference genome), CLARK outperforms in classification...recision the best state-of-the-art methods. http://clark.cs.ucr.edu/Spaced/1553 days ago
Best book Titles for Learning Bionformatics
...seph H. Nadeau, 2000, Kluwer Academic Pub Comparative Genomics, Melody Clark (Editor), 2000, Kluwer Academ...ealth), G. Parmigiani, E. S. Garrett, R. A. Irizarry, S. Zeger , Graeme Clark (Editors), 2003, Springer Ver...3929 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...rograms/NGS-MC/NGS-MC.html Species identification/taxonomic profiling CLARK Taxonomic classification of...omes using k-mer search and LCA assignment Software (C++) http://clark.cs.ucr.edu/ FOCUS Reports o...2383 days ago
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CLARK: Fast, accurate and versatile sequence classification system
CLARK, a method based on a supervised sequence classification using discriminative k-mers. Considering two distinct specific classification problems (see the article for details), namely (1) the taxonomic classification of metagenomic reads to known bacterial genomes, and (2) the assignment ...Tags: CLARK, Fast, accurate, versatile, sequence, classification, system, bacteria
1553 days ago
Comment on "List of gene ontology software and tools"
Chen EY, Tan CM, Kou Y, Duan Q, Wang Z, Meirelles GV, Clark NR, Ma'ayan A. Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool. BMC Bioinformatics. 2013;128(14). http://amp.pharm.mssm.edu/Enrichr/1504 days ago