CNIDARIA: fast, reference-free phylogenomic clustering
...mes and arbitrarily large phylogenetic distances. Results: We present Cnidaria, a practical tool for cluster...and 78% accuracy for species level. Availability and Implementation: Cnidaria is written in C++ and Python...2878 days ago
CNIDARIA: fast, reference-free phylogenomic clustering
Motivation: Identification of biological specimens is a major requirement for a range of applications. Reference-free methods analyse unprocessed sequencing data without relying on prior knowledge, but these do not scale to arbitrarily large genomes and arbitrarily large phylogenetic distances. ...Tags: Bioinformatics, CNIDARIA, Fast, Reference-free, Phylogenomic, Clustering, NGS
2878 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
Innate immune genes tend to be highly conserved in metazoans, even in early divergent lineages such as Cnidaria (jellyfish, corals, hydroids and sea anemones) and Porifera (sponges). H...2732 days ago