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Results for "CRAM"

Bookmarks

• • Neelam Jha@neelam

  

  Picard

  Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF. These file formats are defined in the Hts-specs...

  2921 days ago

• • Jit@jit.aber

  

  HTSlib

  ...racting with high-throughput sequencing data. It consists of three separate repositories: SamtoolsReading/writing/editing/indexing/viewing SAM/BAM/CRAM formatBCFtoolsReading/writing...

  2601 days ago

• +3 more Bookmarks

Bio-Scripts

• • Jit@jit.aber

  

  Downloading GATK !

  ...Count bases in a SAM/BAM/CRAM file CountBasesSpark...Count reads in a SAM/BAM/CRAM file CountReadsSpark...Tools that manipulate read data in SAM, BAM or CRAM format AddCommentsToBam...

  2068 days ago

• • Jit@jit.aber

  

  Install HTSLIB on Ubuntu !

  ...g.mk.in htslib-1.9/configure.ac htslib-1.9/cram/ htslib-1.9/cram/cram.h htslib-1.9/cram/cram_...values.sam htslib-1.9/test/auxf#values_java.cram htslib-1.9/test/auxf.fa hts...ls.o vcfutils.c gcc -g -Wall -O2 -I. -c -o cram/cram_codecs.o cram/cram_codec...

  2012 days ago

• +1 more Bio-Scripts