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YASRA: Reference based assembler
YASRA (Yet Another Short Read Assembler) performs comparative assembly of short read...u.edu/~rsharris/lastz/newer) and add the LASTZ binary in your executable/binary search path before installing YASRA.2635 days ago
WGS Celera Assembler version 8.3rc2
These are release notes for Celera Assembler version 8.3rc2, which was released on May 24, 2015.This dist...ve pre-compiled binary distributions ready for installation.The source code package includes full source code (...2595 days ago
- DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search...
2578 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-...grams. Overall, Enrichr is a comprehensive resource for curated gene sets and a search engine that accumulates biolo...2578 days ago
- A tetra-nucleotide is a fragment of DNA sequence with 4 bases (e.g. AGTC or TTGG). P... et al., 2004). TNA is also fast enough that it can be used as a search engine against a large genome...
2571 days ago
- The process of finishing a genome and moving it from a draft stage...in submission). The executables (as well as source code) for these tools are freely a...contigs and create scaffolds where possible. Source code a...
2555 days ago
Genetic-mapper: SVG Genetic Map Drawer
Genetic-mapper is a perl script able to draw publication-ready vectorial genetic maps. Perl script for creating a publication-ready vectorial genetic/linkage map in Sc...2526 days ago
- BioPerl modules Bio::Graphics + Bio::DB:GFF and example scripts....to find a good way of visualization by experimenting with its options. http://search.cpan.org/~lds/Bio-Graphics-2....
2519 days ago
Perlbrew: admin-free perl installation management tool.
perlbrew is an admin-free perl installation management tool. The latest version is 0.79, read the release note: Release 0.79. Copy & Paste this line int...2502 days ago
- GView is a Java application for viewing and examining prokaryotic genomes in a circular or linear context. It acce...able application licensed under the GNU Public License. The application, source code,...
2500 days ago
