Results for "Comparative Genomes"

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  • OPERA : Optimal Paired-End Read Assembler

    OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wikip...ency etc.) and incorporated features that are important for scaffolding large genomes (multi-library support, bette...

    2802 days ago

  • Sybil

    The Sybil software package provides a primarily web-based front-end to comparative genome datasets warehoused in a chado relational database. It was...College Park to support a number of research projects that involve compara...

    2804 days ago

  • CGView - Circular Genome Viewer

    GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications and websites, or as a visualization tool in a seq...

    2792 days ago

  • BLAST Ring Image Generator (BRIG)

    BRIG is a free cross-platform (Windows/Mac/Unix)...omparisons between a large number of genomes, with a focus on handling gen...coverage can be displayed for draft genomes; customized graphs and annota...uence variation in a set of complete genomes, draft genomes or even raw, u...

    2781 days ago

  • Strudel

    ...is our graphical tool for visualizing genetic and physical maps of genomes for comparative purposes. The application...s to individual markers, and explore syntenic relationships between genomes. All browsing and interaction...

    2781 days ago

  • GeneBreak: a tool to systematically identify genes recurrently affected by the genomic location of chromosomal CNA-associated breaks by a genome-wide approach

    ...rical copy number aberrations (CNAs) of chromosomal segments in tumor genomes. However, there is lack of comput...roach, which can be applied to DNA copy number data obtained by array-Comparative Genomic Hybridization (CG...

    2161 days ago

  • MIRO : miRNA omics

    The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of m...allows to preprocess the Solexa-reads, map them flexibly to several reference genomes using one of four different m...

    2777 days ago

  • VirMet

    Watch out: only a few files are counted in coverage statistic...ble subcommands so far are fetch download genomes update update viral/bacterial database index index genomes wolfpack analyze a Mise...

    2771 days ago

  • Ribbon !!

    Visualization has played an extremely important role in the current genomic revolution to...between species. Supplementary Note 4 shows a comparison of gorilla and human genomes using Ribbon, highlighting ma...

    2760 days ago

  • Graph Genome Suite

    Seven Bridges is the biomedical data analysis company accelerating breakthroughs in genom...nd precision medicine. We build self-improving systems to analyze millions of genomes, including the Graph Gen...

    2753 days ago